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Publication date Communities Collections Article title Author(s) Journal/Conference
29 Jul 2019 BMRC Genome Institute of Singapore Hybrid metagenomic assembly enables high-resolution analysis of resistance determinants and mobile elements in human microbiomes Denis Bertrand, Jim Shaw, Manesh Kalathiyappan, Amanda Hui Qi Ng, M. Senthil Kumar, Chenhao Li, Mirta Dvornicic, Janja Paliska Soldo, Jia Yu Koh, Chengxuan Tong, Oon Tek Ng, Timothy Barkham, Barnaby Young, Kalisvar Marimuthu, Kern Rei Chng, Mile Šikić, Niranjan Nagarajan Nature Biotechnology
31 Jan 2017 BMRC Bioinformatics Institute Edlib: a C/C ++ library for fast, exact sequence alignment using edit distance Martin Šošić, Mile Šikić Bioinformatics
1 Sep 2016 BMRC Bioinformatics Institute SWORD—a highly efficient protein database search Robert Vaser, Dario Pavlović, Mile Šikić Bioinformatics
9 May 2016 BMRC Bioinformatics Institute Evaluation of hybrid and non-hybrid methods for de novo assembly of nanopore reads Ivan Sović, Krešimir Križanović, Karolj Skala, Mile Šikić Bioinformatics
15 Apr 2016 BMRC Bioinformatics Institute Fast and sensitive mapping of nanopore sequencing reads with GraphMap Ivan Sović, Mile Šikić, Andreas Wilm, Shannon Nicole Fenlon, Swaine Chen, Niranjan Nagarajan Nature Communications
23 Nov 2013 BMRC Bioinformatics Institute ExoLocator—an online view into genetic makeup of vertebrate proteins Aik Aun Khoo, Mario Orgrizek-Tomas, Ana Bulovic, Matija Korpar, Ece Gurler, Ivan Slijepcevic, Mile Šikić, Ivana Mihalek Nucleic Acids Research
28 Oct 2013 BMRC Bioinformatics Institute Epidemic centrality – is there an underestimated epidemic impact of network peripheral nodes? Mile Šikić, Alen Lancic, Nino Antulov-Fantulin, Hrvoje Stefancic The European Physical Journal B